bug#30282: package julia build error

[Marco van Hulten]

Hi—

Building julia ends like badly:


$ guix package -i julia
[...]
base64 (2)                |    0.41  |  0.00  |  0.0 |  2.10      | 1559.96
serialize (2)             |    7.05  |  0.29  |  4.1 | 80.75      | 1559.96
WARNING: readuntil(IO,AbstractString) will perform poorly with a long string
WARNING: readuntil(IO,AbstractString) will perform poorly with a long string
WARNING: readuntil(IO,AbstractString) will perform poorly with a long string
Warning: threaded loop executed in order
threads (3)               |   12.18  |  1.90  | 15.6 | 93.54      | 1708.66
enums (3)                 |   12.64  |  0.41  |  3.2 | 147.02     | 1708.66
i18n (3)                  |    0.06  |  0.00  |  0.0 |  0.07      | 1708.66
workspace (3)             |    6.38  |  0.00  |  0.0 |  4.33      | 1708.66
sh: /sbin/ldconfig: No such file or directory
libdl (3)                 |    2.77  |  0.00  |  0.0 | 10.04      | 1708.66
int (3)                   |    9.51  |  0.19  |  2.0 | 29.06      | 1708.66
misc (2)                  |   68.30  |  9.99  | 14.6 | 1734.26    | 1654.81
intset (2)                |    4.31  |  0.14  |  3.3 | 29.06      | 1654.81
checked (3)               |    9.04  |  0.14  |  1.6 | 51.62      | 1708.66
floatfuncs (2)            |   12.98  |  0.34  |  2.6 | 117.90     | 1654.81
inline (2)                |   10.71  |  0.13  |  1.2 | 40.40      | 1654.81
boundscheck (2)           |   24.83  |  0.00  |  0.0 |  8.59      | 1654.81
error (2)                 |    7.12  |  2.34  | 32.9 |  7.45      | 1654.81
cartesian (2)             |    0.07  |  0.00  |  0.0 |  0.05      | 1654.81
asmvariant (2)            |    0.29  |  0.00  |  0.0 |  0.54      | 1654.81
osutils (2)               |    0.10  |  0.00  |  0.0 |  0.25      | 1654.81
channels (2)              |   32.41  | 12.07  | 37.2 | 456.26     | 1654.81
iostream (2)              |    1.04  |  0.00  |  0.0 |  2.89      | 1654.81
WARNING: Method definition f(Tuple{Vararg{Int64, N}}, AbstractArray{T, N}) in 
module Test51Main_specificity at 
/tmp/guix-build-julia-0.6.0.drv-0/julia-0.6.0/test/specificity.jl:87 
overwritten at 
/tmp/guix-build-julia-0.6.0.drv-0/julia-0.6.0/test/specificity.jl:93.
specificity (2)           |    0.29  |  0.00  |  0.0 |  0.84      | 1654.81
fft (2)                   |   61.87  |  1.68  |  2.7 | 541.40     | 1654.81
dsp (2)                   |   19.35  |  0.99  |  5.1 | 245.84     | 1654.81
EOFError()CapturedExceptionEOFError(()CapturedException(EOFError()CapturedException(EOFError(EOFError()),
 EOFError(), , 
Any[Any[(Any[(((::Base.Distributed.##99#100{TCPSocket,TCPSocket,Bool})() at 
event.jl:73, 1)])
Process(33) - Unknown remote, closing connection.
(::Base.Distributed.##99#100{TCPSocket,TCPSocket,Bool})(::Base.Distributed.##99#100{TCPSocket,TCPSocket,Bool})()
 at event.jl:73, 1)])
Process(29) - Unknown remote, closing connection.
() at event.jl:73, 1)])
Process(31) - Unknown remote, closing connection.
EOFError()CapturedException(EOFError()EOFError()CapturedException(EOFErrorCapturedException((),
 EOFErrorEOFError(()), , Any[AnyAny[[(EOFError()CapturedException(EOFError(), 
Any[((::Base.Distributed.##99#100{TCPSocket,TCPSocket,Bool})() at event.jl:73, 
1)])
Process(31) - Unknown remote, closing connection.
EOFError()CapturedException(EOFError(), 
Any[((::Base.Distributed.##99#100{TCPSocket,TCPSocket,Bool})() at event.jl:73, 
1)])
Process(33) - Unknown remote, closing connection.
(((::Base.Distributed.##99#100{TCPSocket,TCPSocket,Bool})() at event.jl:73, 
(::Base.Distributed.##99#100{TCPSocket,TCPSocket,Bool})1)])
Process(34) - Unknown remote, closing connection.
(::Base.Distributed.##99#100{TCPSocket,TCPSocket,Bool})() at event.jl:73, 1)])
Process(30) - Unknown remote, closing connection.
() at event.jl:73, 1)])
Process(32) - Unknown remote, closing connection.
EOFError()CapturedException(EOFError(), 
Any[((::Base.Distributed.##99#100{TCPSocket,TCPSocket,Bool})() at event.jl:73, 
1)])
Process(32) - Unknown remote, closing connection.
EOFError()CapturedException(EOFError(), 
Any[((::Base.Distributed.##99#100{TCPSocket,TCPSocket,Bool})() at event.jl:73, 
1)])
Process(34) - Unknown remote, closing connection.
EOFError()CapturedException(EOFError(), 
Any[((::Base.Distributed.##99#100{TCPSocket,TCPSocket,Bool})() at event.jl:73, 
1)])
Process(33) - Unknown remote, closing connection.
EOFError()CapturedException(EOFError(), 
Any[((::Base.Distributed.##99#100{TCPSocket,TCPSocket,Bool})() at event.jl:73, 
1)])
Process(34) - Unknown remote, closing connection.
distributed (3)           |  190.79  |  0.00  |  0.0 |  1.01      | 1708.66
examples (2)              |   31.02  |  1.51  |  4.9 | 617.02     | 1654.81
ERROR: LoadError: rmprocs: pids [3] not terminated after 30 seconds.
Stacktrace:
 [1] _rmprocs(::Array{Int64,1}, ::Int64) at ./distributed/cluster.jl:807
 [2] #rmprocs#70(::Int64, ::Function, ::Array{Int64,1}, 
::Vararg{Array{Int64,1},N} where N) at ./distributed/cluster.jl:775
 [3] (::##40#46)() at 
/tmp/guix-build-julia-0.6.0.drv-0/julia-0.6.0/test/runtests.jl:93
 [4] cd(::##40#46, ::String) at ./file.jl:70
while loading /tmp/guix-build-julia-0.6.0.drv-0/julia-0.6.0/test/runtests.jl, 
in expression starting on line 29
make[1]: *** [Makefile:18: all] Error 1
make: *** [Makefile:558: test] Error 2
phase `check' failed after 2266.9 seconds
builder for `/gnu/store/zkx3jjnqg043yd3k2kl3lgw57rx39vmy-julia-0.6.0.drv' 
failed with exit code 1
guix package: error: build failed: build of
`/gnu/store/zkx3jjnqg043yd3k2kl3lgw57rx39vmy-julia-0.6.0.drv' failed


One issue seems that /sbin/ldconfig does not exist; this is provided
differently in GuixSD compared to most GNU distros.  The critical
problem appears to be at event.jl:73.

—Marco