bug#29244: guix update -u always wants to update: python-wrapper & python-ipython

[Benjamin Andresen]

Hello everyone,

this is with an empty user account that has no packages installed before this:
> guixsd% guix package -u
> The following packages will be upgraded:
> python-wrapper 3.5.3 → 3.5.3 /gnu/store/xnb9bn2vgr3ch8zznsv23w65bb5psshh-python-wrapper-3.5.3
> python-ipython 5.3.0 → 5.3.0 /gnu/store/7lg8s2kc6k8fxbdx80ykz39kz2lwj08g-python-ipython-5.3.0
>
> nothing to be done

The problem exists with both installed and with them individually.

The full log follows:
> guixsd% guix –version | head -1
> guix (GNU Guix) 011f57695a817f9b13c75e43069e572101a3edf7
> guixsd% guix package -u
> guixsd% guix package -i python-wrapper python-ipython
> The following packages will be installed:
> python-wrapper 3.5.3 /gnu/store/xnb9bn2vgr3ch8zznsv23w65bb5psshh-python-wrapper-3.5.3
> python-ipython 5.3.0 /gnu/store/7lg8s2kc6k8fxbdx80ykz39kz2lwj08g-python-ipython-5.3.0
>
> substitute: updating list of substitutes from 'https://mirror.hydra.gnu.org'… 100.0%
> The following derivations will be built:
> /gnu/store/blf8y4d32qdq18pskbb6izhp293b6g7w-profile.drv
> /gnu/store/zc348d3nn5ib92r1aakkrzmdsw2dkfan-gtk-icon-themes.drv
> /gnu/store/v9012vmlxji3xl46ffjsmcyc0g8fp4vl-xdg-mime-database.drv
> /gnu/store/kil8lpbfg486awimiwx2j9cvlpvil4ii-xdg-desktop-database.drv
> /gnu/store/iai78rn3m2cgqvdd8clw9yj60fvfxqyi-fonts-dir.drv
> /gnu/store/clsaw0ny0k4wjc2c3fbz6ngmhpi0vlsv-gtk-im-modules.drv
> /gnu/store/88smx74xhmk8wnr297dvb1p6jzzqq6zh-ca-certificate-bundle.drv
> /gnu/store/0kcp2mxa01zjmg1s99sw15rbnhb1di3y-info-dir.drv
> /gnu/store/iwavxfqba2j025j3b7h2g024ap9ckgh9-manual-database.drv
> Creating manual page database for 71 packages… done in 11.566 s
> 2 packages in profile
> The following environment variable definitions may be needed:
> export PATH="home/test.guix-profile/bin:/home/test/.guix-profile/sbin${PATH:+:}\(PATH" > export PYTHONPATH="/home/test/.guix-profile/lib/python3.5/site-packages\){PYTHONPATH:+:}\(PYTHONPATH" > export GUIX_GTK3_PATH="/home/test/.guix-profile/lib/gtk-3.0\){GUIX_GTK3PATH:+:}\(GUIX_GTK3_PATH" > export GI_TYPELIB_PATH="/home/test/.guix-profile/lib/girepository-1.0\){GI_TYPELIBPATH:+:}\(GI_TYPELIB_PATH" > export GIO_EXTRA_MODULES="/home/test/.guix-profile/lib/gio/modules\){GIO_EXTRAMODULES:+:}$GIO_EXTRAMODULES"
> guixsd% echo $SHELL
> /gnu/store/4xxrs4ip83c7ji4nh8jclx2j0p1kj6rg-zsh-5.2/bin/zsh
> guixsd% vim .zlogin
> guixsd% guix package -u
> The following packages will be upgraded:
> python-wrapper 3.5.3 → 3.5.3 /gnu/store/xnb9bn2vgr3ch8zznsv23w65bb5psshh-python-wrapper-3.5.3
> python-ipython 5.3.0 → 5.3.0 /gnu/store/7lg8s2kc6k8fxbdx80ykz39kz2lwj08g-python-ipython-5.3.0
>
> nothing to be done
> guixsd% guix package -r python-ipython
> The following package will be removed:
> python-ipython 5.3.0 /gnu/store/7lg8s2kc6k8fxbdx80ykz39kz2lwj08g-python-ipython-5.3.0
>
> substitute: updating list of substitutes from 'https://mirror.hydra.gnu.org'… 100.0%
> The following derivations will be built:
> /gnu/store/xh1f3avgvcbp8agzld2vi878mya5m4nd-profile.drv
> /gnu/store/lkg6zp4qlmnixfzgzb93k0sdspj1n6ma-ca-certificate-bundle.drv
> /gnu/store/6v3cmccrgm1sq86xqi4si95rpj5hhf7n-info-dir.drv
> /gnu/store/1532igqvamrbaaw577mns21cgjm7ggah-fonts-dir.drv
> /gnu/store/hifxa1zb6invg4w1v908ili82dlnys4m-manual-database.drv
> Creating manual page database for 1 packages… done in 0.051 s
> 1 package in profile
>
> guixsd% guix package -u
> The following package will be upgraded:
> python-wrapper 3.5.3 → 3.5.3 /gnu/store/xnb9bn2vgr3ch8zznsv23w65bb5psshh-python-wrapper-3.5.3
>
> substitute: updating list of substitutes from 'https://mirror.hydra.gnu.org'… 100.0%
> The following derivations will be built:
> /gnu/store/svml5qir06llsv8p88vqn55q51qyfhar-profile.drv
> /gnu/store/pg0c1z4z31k4qk3cgakm1ax5cm8vs4k8-info-dir.drv
> /gnu/store/ljiyfird93jprpffk97nhhpx7fx3ckrg-ca-certificate-bundle.drv
> /gnu/store/ipx6hk4g7nalw7nir5bwnbv25a1i0av3-fonts-dir.drv
> /gnu/store/08651512643lavv3d45fcsk8kh7x1i0k-manual-database.drv
> Creating manual page database for 1 packages… done in 0.039 s
> 1 package in profile
> guixsd% guix package -r python-wrapper -i python-ipython
> The following package will be removed:
> python-wrapper 3.5.3 /gnu/store/xnb9bn2vgr3ch8zznsv23w65bb5psshh-python-wrapper-3.5.3
>
> The following package will be installed:
> python-ipython 5.3.0 /gnu/store/7lg8s2kc6k8fxbdx80ykz39kz2lwj08g-python-ipython-5.3.0
>
> substitute: updating list of substitutes from 'https://mirror.hydra.gnu.org'… 100.0%
> The following derivations will be built:
> /gnu/store/3nscgarm0m26gyfpaac7pf9vhwjxbylg-profile.drv
> /gnu/store/rqr8jyiz5nqyzis2zxxiq2vifsmyxp8k-info-dir.drv
> /gnu/store/nxnw1rbdbgcm9n1r32rjsllz4jsn52dp-fonts-dir.drv
> /gnu/store/mnah8vfgs2qblnr18zc5jyiyrwcfg506-xdg-desktop-database.drv
> /gnu/store/j9k8kqhrmbpifp39ak6cchf43svmi8ha-xdg-mime-database.drv
> /gnu/store/i14dmlap8vfa3jgvxamp25gf6jsxkxi1-ca-certificate-bundle.drv
> /gnu/store/8h3hr19jclr9c5134k0kjmanw2x3sbsh-gtk-icon-themes.drv
> /gnu/store/5xys2xj1fvi3k943ia0pdlypg2silrl7-gtk-im-modules.drv
> /gnu/store/wyzv6lrdxd358q96y5v43hm9q2spw4sl-manual-database.drv
> Creating manual page database for 70 packages… done in 10.911 s
> 1 package in profile
>
> guixsd% guix package -u
> The following package will be upgraded:
> python-ipython 5.3.0 → 5.3.0 /gnu/store/7lg8s2kc6k8fxbdx80ykz39kz2lwj08g-python-ipython-5.3.0
>
> nothing to be done
> guixsd% guix package -r python-ipython
> The following package will be removed:
> python-ipython 5.3.0 /gnu/store/7lg8s2kc6k8fxbdx80ykz39kz2lwj08g-python-ipython-5.3.0
>
> The following derivation will be built:
> /gnu/store/4xla7xlznq21and9z7b7k5ym8v72i51l-profile.drv
> 0 packages in profile

And to show that this is not an issue with other packages:

> guixsd% guix package -i hello
> substitute: updating list of substitutes from 'https://mirror.hydra.gnu.org'… 100.0%
> The following package will be installed:
> hello 2.10 /gnu/store/lr8c1yswvrgckkaa6nzdi7q0d618bazs-hello-2.10
>
> substitute: updating list of substitutes from 'https://mirror.hydra.gnu.org'… 100.0%
> The following derivations will be built:
> /gnu/store/rfpcms1idn9527j44nn2f09gbgk1x8sv-profile.drv
> /gnu/store/vl8cn02rldz7wa03rcgc7daid3hz1nn0-info-dir.drv
> /gnu/store/pnaiz7z2156a9yj5hxmmhbkp8mqzc9av-ca-certificate-bundle.drv
> /gnu/store/1f58a70palfbx2pilzfh3wglif2mv077-fonts-dir.drv
> /gnu/store/6cjikirka4hxpg19jly6qagjjsrviy7b-hello-2.10.drv
> /gnu/store/vykvgqizig5yw7rhpmfb9zzm40r8bakk-manual-database.drv
> 0.0 MB will be downloaded:
> /gnu/store/wf65hjwqwpz4wllasn63zysi5irql2sx-hello-2.10
> Downloading https://mirror.hydra.gnu.org/guix/nar/gzip/wf65hjwqwpz4wllasn63zysi5irql2sx-hello-2.10…
> hello-2.10 48KiB
>
> grafting '/gnu/store/wf65hjwqwpz4wllasn63zysi5irql2sx-hello-2.10' -> '/gnu/store/lr8c1yswvrgckkaa6nzdi7q0d618bazs-hello-2.10'…
> Creating manual page database for 1 packages… done in 0.046 s
> 1 package in profile
> guixsd% guix package -u
> guixsd%

Thanks in advance!

–
Best regards,
Benny
0x9EC76EA52B8F32A1
6315 887D 6E46 6967 7AC0 3E76 9EC7 6EA5 2B8F 32A1